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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7706659 chr5:151673961 G/T FILIP1L chr3:99548985-99833357:- -0.22 -6.13 1.83E-9 Box Plot
THCA rs7706925 chr5:45939935 T/C LOC647121 chr1:121260910-121313686:+ 0.38 8.06 6.01E-15 Box Plot
THCA rs7708228 chr5:49790897 G/A LOC647121 chr1:121260910-121313686:+ -0.37 -7.92 1.71E-14 Box Plot
THCA rs77084393 chr5:176593844 G/C LOC388955 chr2:63849182-63850159:- -0.93 -24.52 1.42E-86 Box Plot
THCA rs7708897 chr5:49824043 A/G LOC647121 chr1:121260910-121313686:+ -0.36 -7.51 2.92E-13 Box Plot
THCA rs7709568 chr5:151679516 C/G FILIP1L chr3:99548985-99833357:- -0.22 -6.16 1.5E-9 Box Plot
THCA rs7709598 chr5:151679625 A/G FILIP1L chr3:99548985-99833357:- -0.22 -6.27 7.92E-10 Box Plot
THCA rs7709605 chr5:151679637 A/G FILIP1L chr3:99548985-99833357:- -0.22 -6.27 7.92E-10 Box Plot
THCA rs7709607 chr5:170811294 T/A CLEC2D chr12:9817565-9852151:+ -0.19 -6 3.99E-9 Box Plot
THCA rs7709673 chr5:170844678 A/G CLEC2D chr12:9817565-9852151:+ -0.18 -5.92 6.11E-9 Box Plot
THCA rs7709816 chr5:151679488 G/A FILIP1L chr3:99548985-99833357:- -0.22 -6.36 4.62E-10 Box Plot
THCA rs7710002 chr5:45931795 A/G LOC647121 chr1:121260910-121313686:+ 0.34 7.18 2.66E-12 Box Plot
THCA rs7710145 chr5:49838598 T/C LOC647121 chr1:121260910-121313686:+ -0.37 -7.63 1.3E-13 Box Plot
THCA rs7710269 chr5:176614529 G/A LOC388955 chr2:63849182-63850159:- -0.76 -20.2 4.63E-66 Box Plot
THCA rs77112507 chr2:132202667 T/C CCDC74B chr2:130896860-130902707:- 0.38 6.62 9.77E-11 Box Plot